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    Online gamers crack AIDS enzyme puzzle

    Online gamers have achieved a feat beyond the realm of Second Life or Dungeons and Dragons: they have deciphered the structure of an enzyme of an AIDS-like virus that had thwarted scientists for a decade.

    The exploit is published on Sunday in the journal Nature Structural & Molecular Biology, where -- exceptionally in scientific publishing -- both gamers and researchers are honoured as co-authors.

    Their target was a monomeric protease enzyme, a cutting agent in the complex molecular tailoring of retroviruses, a family that includes HIV.

    Figuring out the structure of proteins is vital for understanding the causes of many diseases and developing drugs to block them.

    But a microscope gives only a flat image of what to the outsider looks like a plate of one-dimensional scrunched-up spaghetti. Pharmacologists, though, need a 3-D picture that "unfolds" the molecule and rotates it in order to reveal potential targets for drugs.

    This is where Foldit comes in.

    Developed in 2008 by the University of Washington, it is a fun-for-purpose video game in which gamers, divided into competing groups, compete to unfold chains of amino acids -- the building blocks of proteins -- using a set of online tools.

    To the astonishment of the scientists, the gamers produced an accurate model of the enzyme in just three weeks.

    Cracking the enzyme "provides new insights for the design of antiretroviral drugs," says the study, referring to the lifeline medication against the human immunodeficiency virus (HIV).

    It is believed to be the first time that gamers have resolved a long-standing scientific problem.

    "We wanted to see if human intuition could succeed where automated methods had failed," Firas Khatib of the university's biochemistry lab said in a press release.

    "The ingenuity of game players is a formidable force that, if properly directed, can be used to solve a wide range of scientific problems."

    One of Foldit's creators, Seth Cooper, explained why gamers had succeeded where computers had failed.

    "People have spatial reasoning skills, something computers are not yet good at," he said.

    "Games provide a framework for bringing together the strengths of computers and humans. The results in this week's paper show that gaming, science and computation can be combined to make advances that were not possible before."

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    147 comments

    • frank  •  8 months ago
      scientist should play games....
    • dante  •  8 months ago
      way to go, university of washington at seattle's computer science program, you are well done and well trained. Congratulation!
    • nestordferminlink  •  8 months ago
      gamers are realists- 'virtually' (ooops..... oxymoron)!
    • Angel  •  8 months ago
      Maybe this says that relying only on experts in the specific fields are restricting the extra-dimensional expansions of that particular science - whether it be microbiology, quantum science, medical, psychology, nutrition, parapsychology, atomic, psychiatry, sociology, archaeology, etc etc.....
      • Christopher 8 months ago
        You don't yet know how right you are. I used 3D modelling and animation to study my invention (now patented). I'm creating a presentation that will teach how it can be adapted to many different scientific, industrial, and commercial applications (it will be specific). I am more or less self-educated in no specific field, but I also taught myself to model and create 3D animations because a short 3D movie for a tank game inspired me back in the '90's. Turn's out, learning this made it possible for me to model and prove what I conceived in my head could really exist. I've since made prototypes and earned a patent. I'd be more specific here but I don't want to spam. I actually have a lot of potential inventions or improvements for existing systems based on this technology, and I expect when I take this public, maybe some people like these gamers (I like first person shooters and racing and TANK GAMES) will come up with applications for this technology that I haven't.
        Gamers are not mindless couch potatoes. Thanks also goes to Programers, computer makers, game creators, the internet community and everyone who tries to do their part in this world.
    • Shirley  •  8 months ago
      cool. But don't play too much, a balance is better. "human intuition" has many potential. Learning need not from schools, intuitive learning is possible also. Science have not discovered what is Akasha Records yet. The earth is a living hard disk. Probably its bullshit to you. There are those who know what this mean.
    • Weihong H  •  8 months ago
      Make a complex problem into an online game, throw it to avid gamers and voila! Problem solved! I'm also impressed how they develop such a game in the first place.
    • Alvin  •  8 months ago
      i proud to be a gamer lol
    • Windsor  •  8 months ago
      Reminded me of the movie Armageddon, where people never knew their asses will be saved by a bunch of oil diggers.
    • TIM  •  8 months ago
      its not gamers lar...its just gamer too geeky and max out the specs of the computers. If only you know about how much effort and hardware goes into putting a new release movie on Bittorrent 1 hr after the first screening ends....and for more thousands to have seen it within the first 24 hrs.
    • David  •  8 months ago
      By the way this article is poorly written, gamers didn't crack anything. Spare CPU cycles did in a massive distributed computing application.
    • David  •  8 months ago
      I cracked the AIDS puzzle -- don't sleep with blacks, and don't sleep with anyone who does sleep with blacks. They are less than 12% of the American population but over 50% of the AIDS cases and more than 75% of the NEW AIDS cases. SO PLAY THE ODDS PEOPLE!
    • A Yahoo! User  •  8 months ago
      Blalanced gaming is not bad. Just that it appears useless (& harmful for some cases) in earlier generations to our less enlightened adults who can only think only studying is good. The stigma just persisted ever since then that's all.
      Till today some adults still do not understand just because they have not seen it for themselves.
      My opinion - everything needs a balance, too much socialising may not be good either.
    • BookLover  •  8 months ago
      AWESOME!
    • Harry  •  8 months ago
      Reminds me of the beginning episode of the Stargate: Universe TV series.
    • joel  •  8 months ago
      bravo.. i believe that not all scientific/mathematical problems can be solve by experts.. need some luck..
      like us.. we, the slowest in our class vs the top 3 in every year level, 2nd year HS, 3rd Year HS and 4th Year HS level.. its a mathematical problem... and in our luck,, only us got the right answer,, even our professors cant believe that we solve the problem while the top students cannot...
    • JDoubleG  •  8 months ago
      Who would have guessed, being a gamer is not a total waste of time after all?
    • Alan T  •  8 months ago
      That is what I told my wife that gaming is good for me lol
      • ManDom 8 months ago
        Good and Bad la...
      • Tamsap 8 months ago
        Grow up
      • Josh 8 months ago
        gotta have to agree with that! I gave up on RPG's a year ago cause I don't know how to play it well. Actually I was just trying to figure why the hell my brother's keep on skipping classes just to play it. The world is surely in their hands and we never had an idea about that.... I give up to my brothers! No more fighting over it! just manage you're time well guys!
    • anon  •  8 months ago
      People calling gamers dumb are clueless. They are superhuman at micromanagement(starcraft), knows about urban planning(simcity), recruited by USAF to fly drones(flightsim), some even transitioned into real sports(car racing).
      • marcus 8 months ago
        Ok. would you get on a plane where the pilot has no practical experience but a ton of hours on a flight sim game ...?
      • Ancient 8 months ago
        yes......
      • Christopher 8 months ago
        If, say, the pilots aboard your flight are incapacitated, and there are no pilots among the passengers, I would opt for a kid with many hours of skillful flight-sim experience over an adult with no experience. Some games don't use true aerodynamics in their simulations so you'd have to have someone who truly understands the reality and physics of flight as well as understand the controls and relative functions of various parts' interactions on an aircraft in flight. Some kids get it, others don't.
        Not much time to interrogate in the above emergency, so go with the smart gamer.
    • M  •  8 months ago
      The world need more peoples like Aaron Stone ☺ more than Naruto the Pang Sai ☠ and this news is the best proof !!!
    • Nothing to Lose  •  8 months ago
      Oh wow... I just downloaded the game a few days ago and saw a youtube video where one of the youtubers jokingly commented: "Achievement unlocked: Cancer cured!"

      Btw, the game Foldit is comepletely free, but it seems quite complex. Good for people who like puzzles I guess, but I haven't tried it yet despite having it on my pc.
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